Bioconductor

We contribute to the Bioconductor project.

Software packages

Contributor

derfinder: A package for performing differential expression analysis at base resolution.
     [ download stats | build devel | build release | GitHub ]

bumphunter: A package implementing a general backend for the bumphunter approach.
     [ download stats | build devel | build release | GitHub ]

minfi: A package for analysing Illumina’s 450k methylation microarray.
     [ download stats | build devel | build release | GitHub ]

polyester: A package for simulating RNA sequencing reads from differential expression experiments.
     [ download stats | build devel | build release | GitHub ]

ballgown: A package for simulating RNA sequencing reads from differential expression experiments.
     [ download stats | build devel | build release | GitHub ]

Experimental data packages

FlowSorted.Blood.450k: A package containing Illumina 450k DNA methylation data for flow sorted blood cells.
     [ download stats ]

FlowSorted.DLPFC.450k: A package containing Illumina 450k DNA methylation data for flow sorted frontal cortex cells.
     [ download stats ]